SpeciesNode Class Reference

Nodes in reaction path graphs. More...

#include <ReactionPath.h>

Detailed Description

Nodes in reaction path graphs.

Definition at line 26 of file ReactionPath.h.

Public Member Functions
	SpeciesNode ()=default
	Default constructor.
virtual	~SpeciesNode ()=default
	Destructor.
int	nPaths () const
	Total number of paths to or from this node.
void	addPath (Path *path)
	add a path to or from this node
double	outflow ()
double	inflow ()
double	netOutflow ()
void	printPaths ()
References
Return a reference to a path object connecting this node to another node.
Path *	path (int n)
const Path *	path (int n) const

Public Attributes
size_t	number = npos
	Species number.
string	name
	Label on graph.
double	value = 0.0
	May be used to set node appearance.
bool	visible = false
	Visible on graph;.

Protected Attributes
double	m_in = 0.0
double	m_out = 0.0
vector< Path * >	m_paths

Constructor & Destructor Documentation

SpeciesNode()

SpeciesNode ( )

default

Default constructor.

~SpeciesNode()

virtual ~SpeciesNode ( )

virtualdefault

Destructor.

Member Function Documentation

path() [1/2]

Path * path ( int  n )

inline

Definition at line 46 of file ReactionPath.h.

path() [2/2]

const Path * path ( int  n ) const

inline

Definition at line 49 of file ReactionPath.h.

nPaths()

int nPaths ( ) const

inline

Total number of paths to or from this node.

Definition at line 55 of file ReactionPath.h.

addPath()

void addPath

(

Path *

path

)

add a path to or from this node

Definition at line 22 of file ReactionPath.cpp.

outflow()

double outflow ( )

inline

Definition at line 62 of file ReactionPath.h.

inflow()

double inflow ( )

inline

Definition at line 65 of file ReactionPath.h.

netOutflow()

double netOutflow ( )

inline

Definition at line 68 of file ReactionPath.h.

printPaths()

void printPaths

(

)

Definition at line 34 of file ReactionPath.cpp.

Member Data Documentation

number

size_t number = npos

Species number.

Definition at line 36 of file ReactionPath.h.

name

string name

Label on graph.

Definition at line 37 of file ReactionPath.h.

value

double value = 0.0

May be used to set node appearance.

Definition at line 38 of file ReactionPath.h.

visible

bool visible = false

Visible on graph;.

Definition at line 39 of file ReactionPath.h.

m_in

double m_in = 0.0

protected

Definition at line 75 of file ReactionPath.h.

m_out

double m_out = 0.0

protected

Definition at line 76 of file ReactionPath.h.

m_paths

vector<Path*> m_paths

protected

Definition at line 77 of file ReactionPath.h.

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The documentation for this class was generated from the following files:

• ReactionPath.h
• ReactionPath.cpp