C1 Class Reference

Handles one species in a reaction. More...

#include <StoichManager.h>

Public Member Functions
	C1 (size_t rxn=0, size_t ic0=0)
void	incrementSpecies (const doublereal *R, doublereal *S) const
void	decrementSpecies (const doublereal *R, doublereal *S) const
void	multiply (const doublereal *S, doublereal *R) const
void	incrementReaction (const doublereal *S, doublereal *R) const
void	decrementReaction (const doublereal *S, doublereal *R) const
void	resizeCoeffs (const std::map< std::pair< size_t, size_t >, size_t > &indices)
void	derivatives (const double *S, const double *R, vector_fp &jac) const
void	scale (const double *R, double *out, double factor) const

Private Attributes
size_t	m_rxn
	Reaction number. More...
size_t	m_ic0
	Species number. More...
size_t	m_jc0
	Index in derivative triplet vector. More...

Detailed Description

Handles one species in a reaction.

See Stoichiometry

Definition at line 130 of file StoichManager.h.

Constructor & Destructor Documentation

C1()

C1 ( size_t  rxn = 0, size_t  ic0 = 0  )

inline

Definition at line 133 of file StoichManager.h.

Member Function Documentation

incrementSpecies()

void incrementSpecies ( const doublereal *  R, doublereal *  S  ) const

inline

Definition at line 138 of file StoichManager.h.

decrementSpecies()

void decrementSpecies ( const doublereal *  R, doublereal *  S  ) const

inline

Definition at line 142 of file StoichManager.h.

multiply()

void multiply ( const doublereal *  S, doublereal *  R  ) const

inline

Definition at line 146 of file StoichManager.h.

incrementReaction()

void incrementReaction ( const doublereal *  S, doublereal *  R  ) const

inline

Definition at line 150 of file StoichManager.h.

decrementReaction()

void decrementReaction ( const doublereal *  S, doublereal *  R  ) const

inline

Definition at line 154 of file StoichManager.h.

resizeCoeffs()

void resizeCoeffs ( const std::map< std::pair< size_t, size_t >, size_t > &  indices )

inline

Definition at line 158 of file StoichManager.h.

derivatives()

void derivatives ( const double *  S, const double *  R, vector_fp &  jac  ) const

inline

Definition at line 163 of file StoichManager.h.

scale()

void scale ( const double *  R, double *  out, double  factor  ) const

inline

Definition at line 169 of file StoichManager.h.

Member Data Documentation

m_rxn

size_t m_rxn

private

Reaction number.

Definition at line 176 of file StoichManager.h.

m_ic0

size_t m_ic0

private

Species number.

Definition at line 178 of file StoichManager.h.

m_jc0

size_t m_jc0

private

Index in derivative triplet vector.

Definition at line 180 of file StoichManager.h.

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The documentation for this class was generated from the following file:

• StoichManager.h