13 ResidJacEval::ResidJacEval(doublereal atol) :
28 "atol must be greater than zero");
33 doublereal*
const ydot)
35 for (
int i = 0; i <
neq_; i++) {
39 for (
int i = 0; i <
neq_; i++) {
47 const doublereal deltaT,
const doublereal* y,
48 const doublereal* ydot)
53 const doublereal* y,
const doublereal* ydot)
59 const doublereal delta_t,
61 const doublereal* ydot)
67 const doublereal*
const ySoln,
68 const doublereal*
const ySolnDot,
69 doublereal*
const deltaYSoln,
70 const doublereal*
const solnWeights)
73 for (
int i = 0; i <
neq_; i++) {
74 deltaYSoln[i] =
m_atol + fabs(1.0E-6 * ySoln[i]);
77 for (
int i = 0; i <
neq_; i++) {
78 deltaYSoln[i] = std::max(1.0E-2 * solnWeights[i], 1.0E-6 * fabs(ySoln[i]));
85 const doublereal*
const ysoln,
86 const doublereal*
const ysolnOld,
87 doublereal*
const ysolnScales)
89 if (ysolnScales && ysolnScales[0] == 0.0) {
90 for (
int i = 0; i <
neq_; i++) {
107 const doublereal delta_t,
108 const doublereal*
const y,
109 const doublereal*
const ydot)
115 doublereal*
const rhs)
121 const doublereal* y,
const doublereal* ydot,
122 doublereal*
const resid,
124 const int id_x,
const doublereal delta_x)
132 double deltaT = -1.0;
137 doublereal cj,
const doublereal*
const y,
139 doublereal*
const resid)
141 doublereal*
const* jac_colPts = J.colPts();
142 return evalJacobianDP(t, delta_t, cj, y, ydot, jac_colPts, resid);
146 const doublereal c_j,
147 const doublereal*
const y,
148 const doublereal*
const ydot,
149 doublereal*
const* jac_colPts,
150 doublereal*
const resid)
Dense, Square (not sparse) matrices.
Base class for exceptions thrown by Cantera classes.
A class for full (non-sparse) matrices with Fortran-compatible data storage, which adds matrix operat...
An error indicating that an unimplemented function has been called.
virtual void calcSolnScales(const doublereal t, const doublereal *const y, const doublereal *const y_old, doublereal *const yScales)
Returns a vector of column scale factors that can be used to column scale Jacobians.
virtual doublereal filterSolnPrediction(const doublereal t, doublereal *const y)
Filter the solution predictions.
virtual int matrixConditioning(doublereal *const matrix, const int nrows, doublereal *const rhs)
Multiply the matrix by another matrix that leads to better conditioning.
virtual int evalJacobianDP(const doublereal t, const doublereal delta_t, doublereal cj, const doublereal *const y, const doublereal *const ydot, doublereal *const *jacobianColPts, doublereal *const resid)
Calculate an analytical Jacobian and the residual at the current time and values.
virtual void user_out(const int ifunc, const doublereal t, const doublereal *y, const doublereal *ydot)
This function may be used to create output at various points in the execution of an application.
virtual int nEquations() const
Return the number of equations in the equation system.
virtual void user_out2(const int ifunc, const doublereal t, const doublereal delta_t, const doublereal *const y, const doublereal *const ydot)
This function may be used to create output at various points in the execution of an application.
virtual int evalJacobian(const doublereal t, const doublereal delta_t, doublereal cj, const doublereal *const y, const doublereal *const ydot, DenseMatrix &J, doublereal *const resid)
Calculate an analytical Jacobian and the residual at the current time and values.
virtual int evalTimeTrackingEqns(const doublereal t, const doublereal delta_t, const doublereal *const y, const doublereal *const ydot)
Evaluate the time tracking equations, if any.
virtual bool evalStoppingCritera(const doublereal t, const doublereal delta_t, const doublereal *const y, const doublereal *const ydot)
Evaluate any stopping criteria other than a final time limit.
virtual int eval(const doublereal t, const doublereal *const y, const doublereal *const ydot, doublereal *const r)
Evaluate the residual function.
void setAtol(doublereal atol)
Set a global value of the absolute tolerance.
virtual int evalResidNJ(const doublereal t, const doublereal delta_t, const doublereal *const y, const doublereal *const ydot, doublereal *const resid, const ResidEval_Type_Enum evalType=Base_ResidEval, const int id_x=-1, const doublereal delta_x=0.0)
Evaluate the residual function.
virtual int calcDeltaSolnVariables(const doublereal t, const doublereal *const y, const doublereal *const ydot, doublereal *const delta_y, const doublereal *const solnWeights=0)
Return a vector of delta y's for calculation of the numerical Jacobian.
virtual doublereal filterNewStep(const doublereal t, const doublereal *const ybase, doublereal *const step)
Filter the solution predictions.
int neq_
Number of equations.
virtual int getInitialConditions(const doublereal t0, doublereal *const y, doublereal *const ydot)
Fill in the initial conditions.
doublereal m_atol
constant value of atol
This file contains definitions of terms that are used in internal routines and are unlikely to need m...
Namespace for the Cantera kernel.
ResidEval_Type_Enum
Differentiates the type of residual evaluations according to functionality.