C_AnyN Class Reference

Handles any number of species in a reaction, including fractional stoichiometric coefficients, and arbitrary reaction orders. More...

#include <StoichManager.h>

Public Member Functions
	C_AnyN (size_t rxn, const std::vector< size_t > &ic, const vector_fp &order_, const vector_fp &stoich_)
size_t	data (std::vector< size_t > &ic)
doublereal	order (size_t n) const
doublereal	stoich (size_t n) const
size_t	speciesIndex (size_t n) const
void	multiply (const doublereal *input, doublereal *output) const
void	incrementSpecies (const doublereal *input, doublereal *output) const
void	decrementSpecies (const doublereal *input, doublereal *output) const
void	incrementReaction (const doublereal *input, doublereal *output) const
void	decrementReaction (const doublereal *input, doublereal *output) const

Private Attributes
size_t	m_n
	Length of the m_ic vector. More...
size_t	m_rxn
	ID of the reaction corresponding to this stoichiometric manager. More...
std::vector< size_t >	m_ic
	Vector of species which are involved with this stoichiometric manager calculations. More...
vector_fp	m_order
	Reaction orders for the reaction. More...
vector_fp	m_stoich
	Stoichiometric coefficients for the reaction, reactant or product side. More...

Detailed Description

Handles any number of species in a reaction, including fractional stoichiometric coefficients, and arbitrary reaction orders.

See Stoichiometry

Definition at line 313 of file StoichManager.h.

Member Data Documentation

m_n

size_t m_n

private

Length of the m_ic vector.

This is the number of species which participate in the reaction order and stoichiometric coefficient vectors for the reactant or product description of the reaction.

Definition at line 404 of file StoichManager.h.

m_rxn

size_t m_rxn

private

ID of the reaction corresponding to this stoichiometric manager.

This is used within the interface to select the array position to read and write to Normally this is associated with the reaction number in an array of quantities indexed by the reaction number, e.g., ROP[irxn].

Definition at line 412 of file StoichManager.h.

m_ic

std::vector<size_t> m_ic

private

Vector of species which are involved with this stoichiometric manager calculations.

This is an integer list of species which participate in either the reaction order matrix or the stoichiometric order matrix for this reaction, m_rxn.

Definition at line 421 of file StoichManager.h.

m_order

vector_fp m_order

private

Reaction orders for the reaction.

This is either for the reactants or products. Length = m_n. Species number, m_ic[n], has a reaction order of m_order[n].

Definition at line 428 of file StoichManager.h.

m_stoich

vector_fp m_stoich

private

Stoichiometric coefficients for the reaction, reactant or product side.

This is either for the reactants or products. Length = m_n. Species number m_ic[m], has a stoichiometric coefficient of m_stoich[n].

Definition at line 435 of file StoichManager.h.

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The documentation for this class was generated from the following file:

• StoichManager.h