Here is a list of all documented files with brief descriptions:

AnyMap.cpp
AnyMap.h
AnyMap.inl.h
application.cpp
application.h
Array.h	Header file for class Cantera::Array2D
BandMatrix.cpp	Banded matrices
BandMatrix.h	Declarations for the class BandMatrix which is a child class of GeneralMatrix for banded matrices handled by solvers (see class Numerical Utilities within Cantera and BandMatrix)
BasisOptimize.cpp	Functions which calculation optimized basis of the stoichiometric coefficient matrix (see /ref equil functions)
BinarySolutionTabulatedThermo.cpp	Implementation file for an binary solution model with tabulated standard state thermodynamic data (see Thermodynamic Properties and class BinarySolutionTabulatedThermo)
BinarySolutionTabulatedThermo.h	Header file for an binary solution model with tabulated standard state thermodynamic data (see Thermodynamic Properties and class BinarySolutionTabulatedThermo)
Boundary1D.cpp
Boundary1D.h	Boundary objects for one-dimensional simulations
BulkKinetics.cpp
BulkKinetics.h
CarbonDioxide.cpp	Representation of substance Carbon Dioxide
CarbonDioxide.h
checkFinite.cpp	Declarations for routines that check for the presence of NaNs in the code
ChemEquil.cpp	Chemical equilibrium
ChemEquil.h	Chemical equilibrium
clib_defs.h
clockWC.cpp	Definitions for a simple class that implements an Ansi C wall clock timer (see Cantera::clockWC)
clockWC.h	Declarations for a simple class that implements an Ansi C wall clock timer (see Cantera::clockWC)
config.h
ConstCpPoly.cpp	Declarations for the SpeciesThermoInterpType object that employs a constant heat capacity assumption (see Species Reference-State Thermodynamic Properties and ConstCpPoly )
ConstCpPoly.h	Headers for the SpeciesThermoInterpType object that employs a constant heat capacity assumption (see Species Reference-State Thermodynamic Properties and ConstCpPoly)
ConstDensityThermo.cpp
ConstDensityThermo.h	Header for a Thermo manager for incompressible ThermoPhases (see Thermodynamic Properties and ConstDensityThermo)
ConstPressureReactor.cpp	A constant pressure zero-dimensional reactor
ConstPressureReactor.h
ct.h
ct2ctml.cpp	Driver for the system call to the python executable that converts cti files to ctml files (see Input File Handling)
ct_defs.h	This file contains definitions of terms that are used in internal routines and are unlikely to need modifying (text for module physConstants (see Physical Constants) is found here)
ctexceptions.cpp
ctexceptions.h	Definitions for the classes that are thrown when Cantera experiences an error condition (also contains errorhandling module text - see Error Handling)
ctfunc.h
ctlapack.h
ctmatlab.h
ctml.cpp	Definitions for functions to read and write CTML
ctml.h	CTML ("Cantera Markup Language") is the variant of XML that Cantera uses to store data
ctmultiphase.h
ctonedim.h
ctreactor.h
ctrpath.h
ctsurf.h
ctxml.h
CVodesIntegrator.cpp
CVodesIntegrator.h
DAE_Solver.h	Header file for class DAE_Solver
DAE_solvers.cpp	Factory routine for picking the DAE solver package
DebyeHuckel.cpp	Declarations for the DebyeHuckel ThermoPhase object, which models dilute electrolyte solutions (see Thermodynamic Properties and DebyeHuckel )
DebyeHuckel.h	Headers for the DebyeHuckel ThermoPhase object, which models dilute electrolyte solutions (see Thermodynamic Properties and DebyeHuckel )
DenseMatrix.cpp
DenseMatrix.h	Headers for the DenseMatrix object, which deals with dense rectangular matrices and description of the numerics groupings of objects (see Numerical Utilities within Cantera and DenseMatrix )
Domain1D.cpp
Domain1D.h
DustyGasTransport.cpp	Implementation file for class DustyGasTransport
DustyGasTransport.h	Headers for the DustyGasTransport object, which models transport properties in porous media using the dusty gas approximation (see Transport Properties for Species in Phases and DustyGasTransport )
Edge.h
EdgeKinetics.h
EdgePhase.h	Declarations for the EdgePhase ThermoPhase object, which models the interface between two surfaces (see Thermodynamic Properties and EdgePhase)
eigen_dense.h
electrolytes.h	Header file for a common definitions used in electrolytes thermodynamics
Elements.cpp	This file contains a database of atomic weights
Elements.h	Contains the getElementWeight function and the definitions of element constraint types
FactoryBase.h	File contains the FactoryBase class declarations
Falloff.cpp	Definitions for member functions of classes derived from Falloff
Falloff.h
FalloffFactory.cpp
FalloffFactory.h	Parameterizations for reaction falloff functions
FalloffMgr.h
FixedChemPotSSTP.cpp	Definition file for the FixedChemPotSSTP class, which represents a fixed-composition incompressible substance with a constant chemical potential (see Thermodynamic Properties and class FixedChemPotSSTP)
FixedChemPotSSTP.h	Header file for the FixedChemPotSSTP class, which represents a fixed-composition incompressible substance with a constant chemical potential (see Thermodynamic Properties and class FixedChemPotSSTP)
flowControllers.cpp
flowControllers.h	Some flow devices derived from class FlowDevice
FlowDevice.cpp
FlowDevice.h
FlowDeviceFactory.cpp
FlowDeviceFactory.h
FlowReactor.cpp	A steady-state plug flow reactor
FlowReactor.h
fmt.h	Wrapper for either system-installed or local headers for fmt
Func1.cpp
Func1.h
FuncEval.cpp
FuncEval.h
funcs.cpp	File containing miscellaneous numerical functions
funcs.h	Header for a file containing miscellaneous numerical functions
funcWrapper.h
GasKinetics.cpp	Homogeneous kinetics in ideal gases
GasKinetics.h
GasTransport.cpp
GasTransport.h
GeneralMatrix.h	Declarations for the class GeneralMatrix which is a virtual base class for matrices handled by solvers (see class Numerical Utilities within Cantera and GeneralMatrix)
GibbsExcessVPSSTP.cpp	Definitions for intermediate ThermoPhase object for phases which employ excess Gibbs free energy formulations (see Thermodynamic Properties and class GibbsExcessVPSSTP)
GibbsExcessVPSSTP.h	Header for intermediate ThermoPhase object for phases which employ Gibbs excess free energy based formulations (see Thermodynamic Properties and class GibbsExcessVPSSTP)
global.cpp
global.h	This file contains definitions for utility functions and text for modules, inputfiles, logs, textlogs, (see Input File Handling, Diagnostic Output, and Writing messages to the screen)
Group.cpp	Implementation file for the Group class used in reaction path analysis
Group.h
Heptane.cpp	Representation of substance Heptane
Heptane.h
HFC134a.cpp
HFC134a.h
HighPressureGasTransport.cpp	Implementation file for class HighPressureGasTransport
HighPressureGasTransport.h	Interface for class HighPressureGasTransport
HMWSoln.cpp	Definitions for the HMWSoln ThermoPhase object, which models concentrated electrolyte solutions (see Thermodynamic Properties and HMWSoln )
HMWSoln.h	Headers for the HMWSoln ThermoPhase object, which models concentrated electrolyte solutions (see Thermodynamic Properties and HMWSoln )
Hydrogen.cpp
Hydrogen.h
IDA_Solver.cpp
IDA_Solver.h	Header file for class IDA_Solver
IdealGasConstPressureReactor.cpp
IdealGasConstPressureReactor.h
IdealGasMix.h
IdealGasPhase.cpp	ThermoPhase object for the ideal gas equation of state - workhorse for Cantera (see Thermodynamic Properties and class IdealGasPhase)
IdealGasPhase.h	ThermoPhase object for the ideal gas equation of state - workhorse for Cantera (see Thermodynamic Properties and class IdealGasPhase)
IdealGasReactor.cpp	A zero-dimensional reactor
IdealGasReactor.h
IdealMolalSoln.cpp	ThermoPhase object for the ideal molal equation of state (see Thermodynamic Properties and class IdealMolalSoln)
IdealMolalSoln.h	ThermoPhase object for the ideal molal equation of state (see Thermodynamic Properties and class IdealMolalSoln)
IdealSolidSolnPhase.cpp	Implementation file for an ideal solid solution model with incompressible thermodynamics (see Thermodynamic Properties and IdealSolidSolnPhase)
IdealSolidSolnPhase.h	Header file for an ideal solid solution model with incompressible thermodynamics (see Thermodynamic Properties and IdealSolidSolnPhase)
IdealSolnGasVPSS.cpp	Definition file for a derived class of ThermoPhase that assumes either an ideal gas or ideal solution approximation and handles variable pressure standard state methods for calculating thermodynamic properties (see Thermodynamic Properties and class IdealSolnGasVPSS)
IdealSolnGasVPSS.h	Definition file for a derived class of ThermoPhase that assumes either an ideal gas or ideal solution approximation and handles variable pressure standard state methods for calculating thermodynamic properties (see Thermodynamic Properties and class IdealSolnGasVPSS)
ImplicitSurfChem.cpp	Definitions for the implicit integration of surface site density equations (see Kinetics Managers and class ImplicitSurfChem)
ImplicitSurfChem.h	Declarations for the implicit integration of surface site density equations (see Kinetics Managers and class ImplicitSurfChem)
importKinetics.cpp	Declarations of global routines for the importing of kinetics data from XML files (see Input File Handling)
importKinetics.h	Definitions of global routines for the importing of data from XML files (see Input File Handling)
IncompressibleSolid.h
Inlet1D.h	Boundary objects for one-dimensional simulations
Integrator.h
Interface.h	Declaration and Definition for the class Interface
InterfaceKinetics.cpp
InterfaceKinetics.h
IonFlow.cpp
IonFlow.h
IonGasTransport.cpp
IonGasTransport.h
IonsFromNeutralVPSSTP.cpp	Definitions for the object which treats ionic liquids as made of ions as species even though the thermodynamics is obtained from the neutral molecule representation
IonsFromNeutralVPSSTP.h	Header for intermediate ThermoPhase object for phases which consist of ions whose thermodynamics is calculated from neutral molecule thermodynamics
Kinetics.cpp	Declarations for the base class for kinetics managers (see Kinetics Managers and class Kinetics )
Kinetics.h	Base class for kinetics managers and also contains the kineticsmgr module documentation (see Kinetics Managers and class Kinetics)
kinetics.h	Support for chemical kinetics calculation from C++ application programs
KineticsFactory.cpp
KineticsFactory.h
LatticePhase.cpp	Definitions for a simple thermodynamics model of a bulk phase derived from ThermoPhase, assuming a lattice of solid atoms (see Thermodynamic Properties and class LatticePhase)
LatticePhase.h	Header for a simple thermodynamics model of a bulk phase derived from ThermoPhase, assuming a lattice of solid atoms (see Thermodynamic Properties and class LatticePhase)
LatticeSolidPhase.cpp	Definitions for a simple thermodynamics model of a bulk solid phase derived from ThermoPhase, assuming an ideal solution model based on a lattice of solid atoms (see Thermodynamic Properties and class LatticeSolidPhase)
LatticeSolidPhase.h	Header for a simple thermodynamics model of a bulk solid phase derived from ThermoPhase, assuming an ideal solution model based on a lattice of solid atoms (see Thermodynamic Properties and class LatticeSolidPhase)
logger.h	Header for Base class for 'loggers' that write text messages to log files (see Writing messages to the screen and class Logger)
MargulesVPSSTP.cpp	Definitions for ThermoPhase object for phases which employ excess Gibbs free energy formulations related to Margules expansions (see Thermodynamic Properties and class MargulesVPSSTP)
MargulesVPSSTP.h	(see Thermodynamic Properties and class MargulesVPSSTP)
MaskellSolidSolnPhase.cpp	Implementation file for an ideal solid solution model with incompressible thermodynamics (see Thermodynamic Properties and MaskellSolidSolnPhase)
MaskellSolidSolnPhase.h	Header file for a solid solution model following Maskell, Shaw, and Tye
Metal.h
MetalPhase.h
Methane.cpp
Methane.h
MixTransport.cpp	Mixture-averaged transport properties for ideal gas mixtures
MixTransport.h	Headers for the MixTransport object, which models transport properties in ideal gas solutions using a mixture averaged approximation (see Transport Properties for Species in Phases and MixTransport )
MixtureFugacityTP.cpp	Methods file for a derived class of ThermoPhase that handles non-ideal mixtures based on the fugacity models (see Thermodynamic Properties and class MixtureFugacityTP)
MixtureFugacityTP.h	Header file for a derived class of ThermoPhase that handles non-ideal mixtures based on the fugacity models (see Thermodynamic Properties and class MixtureFugacityTP)
MMCollisionInt.cpp
MMCollisionInt.h	Monk and Monchick collision integrals
MolalityVPSSTP.cpp	Definitions for intermediate ThermoPhase object for phases which employ molality based activity coefficient formulations (see Thermodynamic Properties and class MolalityVPSSTP)
MolalityVPSSTP.h	Header for intermediate ThermoPhase object for phases which employ molality based activity coefficient formulations (see Thermodynamic Properties and class MolalityVPSSTP)
Mu0Poly.cpp	Definitions for a single-species standard state object derived from SpeciesThermoInterpType based on a piecewise constant mu0 interpolation (see Species Reference-State Thermodynamic Properties and class Mu0Poly)
Mu0Poly.h	Header for a single-species standard state object derived from SpeciesThermoInterpType based on a piecewise constant mu0 interpolation (see Species Reference-State Thermodynamic Properties and class Mu0Poly)
MultiJac.cpp	Implementation file for class MultiJac
MultiJac.h
MultiNewton.cpp	Damped Newton solver for 1D multi-domain problems
MultiNewton.h
MultiPhase.cpp	Definitions for the MultiPhase object that is used to set up multiphase equilibrium problems (see Equilfunctions)
MultiPhase.h	Headers for the MultiPhase object that is used to set up multiphase equilibrium problems (see Equilfunctions)
MultiPhaseEquil.cpp
MultiPhaseEquil.h
MultiSpeciesThermo.cpp	Declarations for a thermodynamic property manager for multiple species in a phase (see Species Reference-State Thermodynamic Properties and MultiSpeciesThermo)
MultiSpeciesThermo.h	Header for a general species thermodynamic property manager for a phase (see MultiSpeciesThermo)
MultiTransport.cpp	Implementation file for class MultiTransport
MultiTransport.h	Interface for class MultiTransport
Nasa9Poly1.cpp	Definitions for a single-species standard state object derived from SpeciesThermoInterpType based on the NASA 9 coefficient temperature polynomial form applied to one temperature region (see Species Reference-State Thermodynamic Properties and class Nasa9Poly1)
Nasa9Poly1.h	Header for a single-species standard state object derived from SpeciesThermoInterpType based on the NASA 9 coefficient temperature polynomial form applied to one temperature region (see Species Reference-State Thermodynamic Properties and class Nasa9Poly1)
Nasa9PolyMultiTempRegion.cpp	Definitions for a single-species standard state object derived from SpeciesThermoInterpType based on the NASA 9 coefficient temperature polynomial form applied to one temperature region (see Species Reference-State Thermodynamic Properties and class Nasa9Poly1)
Nasa9PolyMultiTempRegion.h	Header for a single-species standard state object derived from SpeciesThermoInterpType based on the NASA 9 coefficient temperature polynomial form applied to multiple temperature regions (see Species Reference-State Thermodynamic Properties and class Nasa9PolyMultiTempRegion)
NasaPoly1.h	Header for a single-species standard state object derived from SpeciesThermoInterpType based on the NASA temperature polynomial form applied to one temperature region (see Species Reference-State Thermodynamic Properties and class NasaPoly1)
NasaPoly2.cpp
NasaPoly2.h	Header for a single-species standard state object derived from SpeciesThermoInterpType based on the NASA temperature polynomial form applied to two temperature regions (see Species Reference-State Thermodynamic Properties and class NasaPoly2)
Nitrogen.cpp
Nitrogen.h
ODE_integrators.cpp
OneDim.cpp
OneDim.h
onedim.h
Oxygen.cpp
Oxygen.h
PDSS.cpp	Implementation of a pressure dependent standard state virtual function (see class PDSS)
PDSS.h	Declarations for the virtual base class PDSS (pressure dependent standard state) which handles calculations for a single species in a phase (see Species Standard-State Thermodynamic Properties and class PDSS)
PDSS_ConstVol.cpp	Implementation of a pressure dependent standard state virtual function
PDSS_ConstVol.h	Declarations for the class PDSS_ConstVol (pressure dependent standard state) which handles calculations for a single species with a constant molar volume in a phase (see class Species Standard-State Thermodynamic Properties and PDSS_ConstVol)
PDSS_HKFT.cpp	Definitions for the class PDSS_HKFT (pressure dependent standard state) which handles calculations for a single species in a phase using the HKFT standard state (see Species Standard-State Thermodynamic Properties and class PDSS_HKFT)
PDSS_HKFT.h	Declarations for the class PDSS_HKFT (pressure dependent standard state) which handles calculations for a single species in a phase using the HKFT standard state (see Species Standard-State Thermodynamic Properties and class PDSS_HKFT)
PDSS_IdealGas.cpp	Implementation of a pressure dependent standard state virtual function
PDSS_IdealGas.h	Declarations for the class PDSS_IdealGas (pressure dependent standard state) which handles calculations for a single ideal gas species in a phase (see Species Standard-State Thermodynamic Properties and class PDSS_IdealGas)
PDSS_IonsFromNeutral.cpp	Implementation of a pressure dependent standard state virtual function
PDSS_IonsFromNeutral.h	Declarations for the class PDSS_IonsFromNeutral ( which handles calculations for a single ion in a fluid, whose properties are calculated from another neutral molecule
PDSS_SSVol.cpp	Implementation of a pressure dependent standard state virtual function
PDSS_SSVol.h	Declarations for the class PDSS_SSVol (pressure dependent standard state) which handles calculations for a single species with an expression for the standard state molar volume in a phase given by an enumerated data type (see class Species Standard-State Thermodynamic Properties and PDSS_SSVol)
PDSS_Water.cpp
PDSS_Water.h	Implementation of a pressure dependent standard state virtual function for a Pure Water Phase (see Species Standard-State Thermodynamic Properties and class PDSS_Water)
PDSSFactory.cpp
PDSSFactory.h
Phase.cpp	Definition file for class Phase
Phase.h	Header file for class Phase
plots.cpp
plots.h	Contains declarations for utility functions for outputing to plotting programs
polyfit.cpp
polyfit.h
PureFluid.h
PureFluidPhase.cpp	Definitions for a ThermoPhase object for a pure fluid phase consisting of gas, liquid, mixed-gas-liquid and supercritical fluid (see Thermodynamic Properties and class PureFluidPhase)
PureFluidPhase.h	Header for a ThermoPhase class for a pure fluid phase consisting of gas, liquid, mixed-gas-liquid and supercrit fluid (see Thermodynamic Properties and class PureFluidPhase)
RateCoeffMgr.h
Reaction.cpp
Reaction.h
reaction_defs.h	This file defines some constants used to specify reaction types
ReactionPath.cpp	Implementation file for classes used in reaction path analysis
ReactionPath.h	Classes for reaction path analysis
reactionpaths.h
Reactor.cpp	A zero-dimensional reactor
Reactor.h
ReactorBase.cpp
ReactorBase.h
ReactorFactory.cpp
ReactorFactory.h
ReactorNet.cpp
ReactorNet.h
ReactorSurface.cpp
ReactorSurface.h	Header file for class ReactorSurface
RedlichKisterVPSSTP.cpp	Definitions for ThermoPhase object for phases which employ excess Gibbs free energy formulations related to RedlichKister expansions (see Thermodynamic Properties and class RedlichKisterVPSSTP)
RedlichKisterVPSSTP.h	(see Thermodynamic Properties and class RedlichKisterVPSSTP)
RedlichKwongMFTP.cpp
RedlichKwongMFTP.h
refine.cpp
refine.h
Reservoir.h
ResidEval.h
ResidJacEval.cpp
ResidJacEval.h	Dense, Square (not sparse) matrices
RxnRates.cpp
RxnRates.h
ShomatePoly.h	Header for a single-species standard state object derived from SpeciesThermoInterpType based on the Shomate temperature polynomial form applied to one temperature region (see Species Reference-State Thermodynamic Properties and class ShomatePoly and ShomatePoly2)
Sim1D.cpp
Sim1D.h
SingleSpeciesTP.cpp	Definitions for the SingleSpeciesTP class, which is a filter class for ThermoPhase, that eases the construction of single species phases ( see Thermodynamic Properties and class SingleSpeciesTP)
SingleSpeciesTP.h	Header for the SingleSpeciesTP class, which is a filter class for ThermoPhase, that eases the construction of single species phases ( see Thermodynamic Properties and class SingleSpeciesTP)
Solution.cpp	Definition file for class Solution
Solution.h
solveSP.cpp
solveSP.h	Header file for implicit surface problem solver (see Chemical Kinetics and class solveSP)
Species.cpp
Species.h	Declaration for class Cantera::Species
SpeciesThermoFactory.cpp	Definitions for factory functions to build instances of classes that manage the standard-state thermodynamic properties of a set of species (see Species Reference-State Thermodynamic Properties);
SpeciesThermoFactory.h	Header for factory functions to build instances of classes that manage the standard-state thermodynamic properties of a set of species (see Species Reference-State Thermodynamic Properties);
SpeciesThermoInterpType.cpp
SpeciesThermoInterpType.h	Pure Virtual Base class for individual species reference state thermodynamic managers and text for the spthermo module (see Species Reference-State Thermodynamic Properties and class SpeciesThermoInterpType )
speciesThermoTypes.h	Contains const definitions for types of species reference-state thermodynamics managers (see Species Reference-State Thermodynamic Properties)
StFlow.cpp
StFlow.h
StoichManager.h
StoichSubstance.cpp	Definition file for the StoichSubstance class, which represents a fixed-composition incompressible substance (see Thermodynamic Properties and class StoichSubstance)
StoichSubstance.h	Header file for the StoichSubstance class, which represents a fixed-composition incompressible substance (see Thermodynamic Properties and class StoichSubstance)
stringUtils.cpp	Contains definitions for string manipulation functions within Cantera
stringUtils.h	Contains declarations for string manipulation functions within Cantera
Sub.cpp
Sub.h
SurfPhase.cpp	Definitions for a simple thermodynamic model of a surface phase derived from ThermoPhase, assuming an ideal solution model (see Thermodynamic Properties and class SurfPhase)
SurfPhase.h	Header for a simple thermodynamics model of a surface phase derived from ThermoPhase, assuming an ideal solution model (see Thermodynamic Properties and class SurfPhase)
thermo.h	Support for thermo property calculation from C++ application programs
ThermoFactory.cpp	Definitions for the factory class that can create known ThermoPhase objects (see Thermodynamic Properties and class ThermoFactory)
ThermoFactory.h	Headers for the factory class that can create known ThermoPhase objects (see Thermodynamic Properties and class ThermoFactory)
ThermoPhase.cpp	Definition file for class ThermoPhase, the base class for phases with thermodynamic properties (see class ThermoPhase)
ThermoPhase.h	Header file for class ThermoPhase, the base class for phases with thermodynamic properties, and the text for the Module thermoprops (see Thermodynamic Properties and class ThermoPhase)
ThirdBodyCalc.h
transport.h	Support for transport property calculation from C++ application programs
TransportBase.cpp	Mixture-averaged transport properties for ideal gas mixtures
TransportBase.h	Headers for the Transport object, which is the virtual base class for all transport property evaluators and also includes the tranprops group definition (see Transport Properties for Species in Phases and Transport )
TransportData.cpp
TransportData.h
TransportFactory.cpp	Implementation file for class TransportFactory
TransportFactory.h	Header file defining class TransportFactory (see TransportFactory)
TransportParams.cpp	Class that holds the data that is read in from the XML file, and which is used for processing of the transport object (see Transport Properties for Species in Phases and TransportParams )
TransportParams.h	Class that holds the data that is read in from the input file, and which is used for processing of the transport object (see Transport Properties for Species in Phases and TransportParams )
Units.cpp
units.h	Header for units conversion utilities, which are used to translate user input from input files (See Input File Handling and class Unit)
Units.h	Header for unit conversion utilities, which are used to translate user input from input files (See Input File Handling and class Units)
UnityLewisTransport.h	Headers for the UnityLewisTransport object, which models transport properties in ideal gas solutions using the unity Lewis number approximation (see Transport Properties for Species in Phases and UnityLewisTransport )
utilities.h	Various templated functions that carry out common vector operations (see Templated Utility Functions)
utils.cpp
utils.h
ValueCache.cpp
ValueCache.h
vcs_defs.h	Defines and definitions within the vcs package
vcs_elem.cpp	This file contains the algorithm for checking the satisfaction of the element abundances constraints and the algorithm for fixing violations of the element abundances constraints
vcs_elem_rearrange.cpp	Contains implementations for rearranging the element columns, and it contains the algorithm for choosing the rearrangement
vcs_Gibbs.cpp	Functions which calculate the extrinsic Gibbs Free energies
vcs_inest.cpp	Implementation methods for obtaining a good initial guess
vcs_internal.h	Internal declarations for the VCSnonideal package
vcs_MultiPhaseEquil.cpp	Driver routine for the VCSnonideal equilibrium solver package
vcs_MultiPhaseEquil.h	Interface class for the vcsnonlinear solver
vcs_phaseStability.cpp	Implementation class for functions associated with determining the stability of a phase (see Class VCS_SOLVE and Equilfunctions )
vcs_prep.cpp	This file contains some prepatory functions
vcs_prob.cpp	Implementation for the Interface class for the vcs thermo equilibrium solver package,
vcs_report.cpp
vcs_rxnadj.cpp	Routines for carrying out various adjustments to the reaction steps
vcs_setMolesLinProg.cpp
vcs_solve.cpp
vcs_solve.h	Header file for the internal object that holds the vcs equilibrium problem (see Class VCS_SOLVE and Equilfunctions )
vcs_solve_TP.cpp	Implementation file that contains the main algorithm for finding an equilibrium
vcs_species_thermo.cpp	Implementation for the VCS_SPECIES_THERMO object
vcs_species_thermo.h
vcs_SpeciesProperties.cpp
vcs_SpeciesProperties.h
vcs_TP.cpp
vcs_util.cpp	Internal definitions for utility functions for the VCSnonideal package
vcs_VolPhase.cpp
vcs_VolPhase.h	Header for the object representing each phase within vcs
VPStandardStateTP.cpp	Definition file for a derived class of ThermoPhase that handles variable pressure standard state methods for calculating thermodynamic properties (see Thermodynamic Properties and class VPStandardStateTP)
VPStandardStateTP.h	Header file for a derived class of ThermoPhase that handles variable pressure standard state methods for calculating thermodynamic properties (see Thermodynamic Properties and class VPStandardStateTP)
Wall.cpp
Wall.h	Header file for base class WallBase
WallFactory.cpp
WallFactory.h
Water.cpp
Water.h
WaterProps.cpp
WaterProps.h	Header for a class used to house several approximation routines for properties of water
WaterPropsIAPWS.cpp	Definitions for a class for calculating the equation of state of water from the IAPWS 1995 Formulation based on the steam tables thermodynamic basis (See class WaterPropsIAPWS)
WaterPropsIAPWS.h	Headers for a class for calculating the equation of state of water from the IAPWS 1995 Formulation based on the steam tables thermodynamic basis (See class WaterPropsIAPWS)
WaterPropsIAPWSphi.cpp	Definitions for Lowest level of the classes which support a real water model (see class WaterPropsIAPWS and class WaterPropsIAPWSphi )
WaterPropsIAPWSphi.h	Header for Lowest level of the classes which support a real water model (see class WaterPropsIAPWS and class WaterPropsIAPWSphi)
WaterSSTP.cpp	Definitions for a ThermoPhase class consisting of pure water (see Thermodynamic Properties and class WaterSSTP)
WaterSSTP.h	Declares a ThermoPhase class consisting of pure water (see Thermodynamic Properties and class WaterSSTP)
WaterTransport.cpp
WaterTransport.h	Header file defining class WaterTransport
wrappers.h
xml.cpp	Classes providing support for XML data files
xml.h	Classes providing support for XML data files
yaml.h
zerodim.h