AqueousKinetics Member List

This is the complete list of members for AqueousKinetics, including all inherited members.

_update_rates_C()	AqueousKinetics
_update_rates_T()	AqueousKinetics
addElementaryReaction(ElementaryReaction &r) (defined in BulkKinetics)	BulkKinetics	protectedvirtual
addPhase(thermo_t &thermo)	Kinetics	virtual
addReaction(shared_ptr< Reaction > r)	AqueousKinetics	virtual
AqueousKinetics(thermo_t *thermo=0)	AqueousKinetics
assignShallowPointers(const std::vector< thermo_t *> &tpVector)	Kinetics	virtual
BulkKinetics(thermo_t *thermo=0) (defined in BulkKinetics)	BulkKinetics
checkDuplicates(bool throw_err=true) const	Kinetics	virtual
checkDuplicateStoich(std::map< int, double > &r1, std::map< int, double > &r2) const	Kinetics	protected
checkPhaseArraySize(size_t mm) const	Kinetics
checkPhaseIndex(size_t m) const	Kinetics
checkReactionArraySize(size_t ii) const	Kinetics
checkReactionBalance(const Reaction &R)	Kinetics	protected
checkReactionIndex(size_t m) const	Kinetics
checkSpeciesArraySize(size_t mm) const	Kinetics
checkSpeciesIndex(size_t k) const	Kinetics
duplMyselfAsKinetics(const std::vector< thermo_t *> &tpVector) const	AqueousKinetics	virtual
finalize()	Kinetics	virtual
getActivityConcentrations(doublereal *const conc)	Kinetics	inlinevirtual
getCreationRates(doublereal *cdot)	Kinetics	virtual
getDeltaElectrochemPotentials(doublereal *deltaM)	Kinetics	inlinevirtual
getDeltaEnthalpy(doublereal *deltaH)	BulkKinetics	virtual
getDeltaEntropy(doublereal *deltaS)	BulkKinetics	virtual
getDeltaGibbs(doublereal *deltaG)	BulkKinetics	virtual
getDeltaSSEnthalpy(doublereal *deltaH)	BulkKinetics	virtual
getDeltaSSEntropy(doublereal *deltaS)	BulkKinetics	virtual
getDeltaSSGibbs(doublereal *deltaG)	BulkKinetics	virtual
getDestructionRates(doublereal *ddot)	Kinetics	virtual
getEquilibriumConstants(doublereal *kc)	AqueousKinetics	virtual
getFwdRateConstants(doublereal *kfwd)	AqueousKinetics	virtual
getFwdRatesOfProgress(doublereal *fwdROP)	Kinetics	virtual
getNetProductionRates(doublereal *wdot)	Kinetics	virtual
getNetRatesOfProgress(doublereal *netROP)	Kinetics	virtual
getReactionDelta(const doublereal *property, doublereal *deltaProperty)	Kinetics	virtual
getRevRateConstants(doublereal *krev, bool doIrreversible=false)	BulkKinetics	virtual
getRevRatesOfProgress(doublereal *revROP)	Kinetics	virtual
getRevReactionDelta(const doublereal *g, doublereal *dg)	Kinetics	virtual
init()	Kinetics	inlinevirtual
invalidateCache() (defined in BulkKinetics)	BulkKinetics	virtual
isReversible(size_t i)	BulkKinetics	virtual
Kinetics()	Kinetics
Kinetics(const Kinetics &)	Kinetics
kineticsSpeciesIndex(size_t k, size_t n) const	Kinetics	inline
kineticsSpeciesIndex(const std::string &nm) const	Kinetics
kineticsSpeciesIndex(const std::string &nm, const std::string &ph) const	Kinetics
kineticsSpeciesName(size_t k) const	Kinetics
kineticsType() const	AqueousKinetics	inlinevirtual
m_cache	Kinetics	protected
m_conc (defined in BulkKinetics)	BulkKinetics	protected
m_dn	BulkKinetics	protected
m_grt (defined in BulkKinetics)	BulkKinetics	protected
m_irrev	BulkKinetics	protected
m_irrevProductStoich	Kinetics	protected
m_kk	Kinetics	protected
m_mindim	Kinetics	protected
m_perturb	Kinetics	protected
m_phaseindex	Kinetics	protected
m_rates (defined in BulkKinetics)	BulkKinetics	protected
m_reactantStoich	Kinetics	protected
m_reactions	Kinetics	protected
m_revindex	BulkKinetics	protected
m_revProductStoich	Kinetics	protected
m_rfn	Kinetics	protected
m_rkcn	Kinetics	protected
m_ROP_ok (defined in BulkKinetics)	BulkKinetics	protected
m_ropf	Kinetics	protected
m_ropnet	Kinetics	protected
m_ropr	Kinetics	protected
m_rxnphase	Kinetics	protected
m_skipUndeclaredSpecies	Kinetics	protected
m_skipUndeclaredThirdBodies	Kinetics	protected
m_start	Kinetics	protected
m_surfphase	Kinetics	protected
m_temp (defined in BulkKinetics)	BulkKinetics	protected
m_thermo	Kinetics	protected
modifyElementaryReaction(size_t i, ElementaryReaction &rNew) (defined in BulkKinetics)	BulkKinetics	protectedvirtual
modifyReaction(size_t i, shared_ptr< Reaction > rNew)	AqueousKinetics	virtual
multiplier(size_t i) const	Kinetics	inline
nPhases() const	Kinetics	inline
nReactions() const	Kinetics	inline
nTotalSpecies() const	Kinetics	inline
operator=(const Kinetics &right)	Kinetics
phaseIndex(const std::string &ph)	Kinetics	inline
productOrder(int k, int i) const	Kinetics	inlinevirtual
productStoichCoeff(size_t k, size_t i) const	Kinetics	virtual
productString(size_t i) const	Kinetics	inline
reactantOrder(size_t k, size_t i) const	Kinetics	inlinevirtual
reactantStoichCoeff(size_t k, size_t i) const	Kinetics	virtual
reactantString(size_t i) const	Kinetics	inline
reaction(size_t i)	Kinetics
reaction(size_t i) const (defined in Kinetics)	Kinetics
reactionPhaseIndex()	Kinetics	inline
reactionString(size_t i) const	Kinetics	inline
reactionType(size_t i) const	Kinetics	inlinevirtual
ready() const	Kinetics	inlinevirtual
resizeSpecies()	BulkKinetics	virtual
selectPhase(const doublereal *data, const thermo_t *phase, doublereal *phase_data)	Kinetics
setMultiplier(size_t i, double f)	BulkKinetics	virtual
skipUndeclaredSpecies(bool skip)	Kinetics	inline
skipUndeclaredThirdBodies(bool skip)	Kinetics	inline
speciesPhase(const std::string &nm)	Kinetics
speciesPhase(size_t k)	Kinetics	inline
speciesPhaseIndex(size_t k)	Kinetics
surfacePhaseIndex()	Kinetics	inline
thermo(size_t n=0)	Kinetics	inline
thermo(size_t n=0) const (defined in Kinetics)	Kinetics	inline
type() const	AqueousKinetics	inlinevirtual
updateKc()	AqueousKinetics
updateROP() (defined in AqueousKinetics)	AqueousKinetics	virtual
~Kinetics() (defined in Kinetics)	Kinetics	virtual